Downloads

You can download all structured data for molecules, fragments, and targets below in CSV or SDF format. All data was originally sourced from the ChEMBL database and processed using cheminformatics workflows with RDKit.

In the future, we intend to extend FragmentSAR with synthetic route suggestions and enriched SAR annotation tools.

Dataset Description Download
Molecules All molecules with ChEMBL IDs, SMILES, and target/fragments mapping. CSV SDF
Fragments Fragment SMILES, frequency counts, and linked molecules. CSV
Targets Protein targets, ChEMBL IDs, organism and associated bioactivity data. CSV